Stem-loop mmu-mir-190b

Accession

MI0005478

Symbol

MGI: Mir190b

Description

Mus musculus mmu-mir-190b precursor miRNA

Gene family

MIPF0000076; mir-190

Literature search

22 open access papers mention mmu-mir-190b
(88 sentences)

Sequence

2251 reads, 34 reads per million, 95 experiments

ugcuucugugUGAUAUGUUUGAUAUUGGGUUGuuaaauuaugaaccaACUGAAUGUCAAGCAUACUCUCAcagcaguaag
((((.(((((.(((((((((((((((.(((((((........)).))))).))))))))))))).)).))))).))))..

Structure

--    u     U  -             G     -  aaa 
  ugcu cugug GA UAUGUUUGAUAUU GGUUG uu   u
  |||| ||||| || ||||||||||||| ||||| ||    
  auga gacAC CU AUACGAACUGUAA UCAac aa   u
ga    c     U  C             G     c  gua 

Annotation confidence High

Genome context

chr3: 90070020-90070099 [+]

Mature mmu-miR-190b-5p

• Accession: MIMAT0004852
• Description: Mus musculus mmu-miR-190b-5p mature miRNA
• Sequence: 11 - UGAUAUGUUUGAUAUUGGGUUG - 32
• Evidence: experimental ; cloned [1], Illumina [2-3]

Mature mmu-miR-190b-3p

• Accession: MIMAT0017267
• Description: Mus musculus mmu-miR-190b-3p mature miRNA
• Sequence: 48 - ACUGAAUGUCAAGCAUACUCUCA - 70
• Evidence: experimental ; Illumina [3]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


3. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009