miRBase entry: mmu-mir-509

Stem-loop mmu-mir-509


Accession
MI0005516
Symbol
MGI: Mir509
Description
Mus musculus mmu-mir-509 precursor miRNA
Gene family
MIPF0000130; mir-506

Literature search
6 open access papers mention mmu-mir-509
(11 sentences)

Sequence

gugguucuuUACUCCAGAAUGUGGCAAUCAUgcauaauuaaaugUGAUUGACAUUUCUGUAAUGGaguaacacau
(((...(((((...(((((.(((.(((((..((((......))))))))).))))))))...)))))...)))..

Structure
--   guu     CUC     U   G     AU    aa 
  gug   cuuUA   CAGAA GUG CAAUC  gcau  u
  |||   |||||   ||||| ||| |||||  ||||   
  cac   gaGGU   GUCUU UAC GUUAG  Ugua  u
ua   aau     AAU     -   A     --    aa 


Annotation confidence Not enough data
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Genome context
chrX: 68010105-68010179 [-]

Database links

Mature mmu-miR-509-5p

Accession MIMAT0004890
Description Mus musculus mmu-miR-509-5p mature miRNA
Sequence 10 - UACUCCAGAAUGUGGCAAUCAU - 31
Evidence not_experimental

Mature mmu-miR-509-3p

Accession MIMAT0004891
Description Mus musculus mmu-miR-509-3p mature miRNA
Sequence 45 - UGAUUGACAUUUCUGUAAUGG - 65
Evidence not_experimental

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414