miRBase entry: mmu-mir-574

Stem-loop mmu-mir-574


Accession
MI0005518
Symbol
MGI: Mir574
Description
Mus musculus mmu-mir-574 precursor miRNA
Gene family
MIPF0000419; mir-574

Literature search
38 open access papers mention mmu-mir-574
(233 sentences)

Sequence

13320 reads, 286 reads per million, 111 experiments
ugcgggcgugUGAGUGUGUGUGUGUGAGUGUGUgucgcuccaagucCACGCUCAUGCACACACCCACAcgcccgcacg
((((((((((((.(.(((((((((((((((((.(.(.......).)))))))))))))))))))))))))))))))..

Structure
--            A U                 U u gc 
  ugcgggcgugUG G GUGUGUGUGUGAGUGUG g c  u
  |||||||||||| | ||||||||||||||||| | |  c
  acgcccgcACAC C CACACACGUACUCGCAC c g  c
gc            - -                 - u aa 


Annotation confidence High
Do you think this miRNA is real?

Genome context
chr5: 64970318-64970395 [+]

Database links

Mature mmu-miR-574-5p

Accession MIMAT0004893
Description Mus musculus mmu-miR-574-5p mature miRNA
Sequence 11 - UGAGUGUGUGUGUGUGAGUGUGU - 33
Evidence experimental
cloned [1], Illumina [2]
Database links
Predicted targets

Mature mmu-miR-574-3p

Accession MIMAT0004894
Description Mus musculus mmu-miR-574-3p mature miRNA
Sequence 47 - CACGCUCAUGCACACACCCACA - 68
Evidence experimental
cloned [1], Illumina [2]
Database links
Predicted targets

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 20215419
    MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
    "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
    "Mol Hum Reprod (2010) 16:463-471