miRBase entry: mtr-MIR171c

Stem-loop mtr-MIR171c


Accession
MI0005597
Description
Medicago truncatula mtr-MIR171c precursor miRNA
Gene family
MIPF0000030; MIR171_1

Literature search
8 open access papers mention mtr-MIR171c
(60 sentences)

Sequence

auugagauauuggcuugguucacucagaagaaacaaaaaauaacacuacuugugaauguuuugauuuugauuuugauuuUGAUUGAGCCGUGCCAAUAUUucaaa
.(((((((((((((.(((((((.(((((((((((((((((((.(((.....)))..))))....))))).))))..)))))).))))))).))))))))))))).

Structure
a             u       c      --    -     ----    -a   u 
 uugagauauuggc ugguuca ucagaa  gaaa caaaa    aaua  cac a
 ||||||||||||| ||||||| ||||||  |||| |||||    ||||  ||| c
 aacuUUAUAACCG GCCGAGU AGUuuu  uuuu guuuu    uugu  gug u
a             U       U      ag    a     aguu    aa   u 


Annotation confidence Not enough data
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Genome context
chr5: 8935780-8935884 [+]

Database links

Mature mtr-miR171c

Accession MIMAT0011083
Description Medicago truncatula mtr-miR171c mature miRNA
Sequence 80 - UGAUUGAGCCGUGCCAAUAUU - 100
Evidence not_experimental

References


  1. "Bonnet E"
    (2007) None: