miRBase entry: mtr-MIR156f

Stem-loop mtr-MIR156f


Accession
MI0005605
Description
Medicago truncatula mtr-MIR156f precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
10 open access papers mention mtr-MIR156f
(77 sentences)

Sequence

guuugUUGACAGAAGAUAGAGAGCACaucugaacaaacacaaaagacauuguguuugaacaguugugugcucucugcucuucugccaacauacu
((.(((((.((((((((((((((((((((((..(((((((((......)))))))))..)))..)))))))))))).))))))).))))).)).

Structure
-  u     A       -            --   aa         aa 
 gu ugUUG CAGAAGA UAGAGAGCACau  cug  caaacacaa  g
 || ||||| ||||||| ||||||||||||  |||  |||||||||   
 ca acaac gucuucu gucucucgugug  gac  guuuguguu  a
u  u     c       c            uu   aa         ac 


Annotation confidence Not enough data
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Genome context
chr6: 4845679-4845772 [-]

Database links

Mature mtr-miR156f

Accession MIMAT0011091
Description Medicago truncatula mtr-miR156f mature miRNA
Sequence 6 - UUGACAGAAGAUAGAGAGCAC - 26
Evidence experimental
454 [2], Northern [2]

References

  1. PubMed ID: 19555436
    Cloning and characterization of small RNAs from Medicago truncatula reveals four novel legume-specific microRNA families
    "Jagadeeswaran G, Zheng Y, Li YF, Shukla LI, Matts J, Hoyt P, Macmil SL, Wiley GB, Roe BA, Zhang W, Sunkar R"
    "New Phytol (2009) 184:85-98


  2. "Bonnet E"
    (2007) None: