miRBase entry: mtr-MIR164c

Stem-loop mtr-MIR164c


Accession
MI0005616
Description
Medicago truncatula mtr-MIR164c precursor miRNA
Gene family
MIPF0000045; MIR164

Literature search
4 open access papers mention mtr-MIR164c
(64 sentences)

Sequence

cuuguUGGAGAAGCAGGGCACGUGCAaccguagaucucucucaaacuucaaucucauuuugcacgugcuccacuuuuccaacuuga
(..((((((((((..((((((((((((....((((...............))))....))))))))))))..))))))))))..).

Structure
- uu          CA            ccgu    cucucu 
 c  guUGGAGAAG  GGGCACGUGCAa    agau      c
 |  ||||||||||  ||||||||||||    ||||      a
 g  caaccuuuuc  cucgugcacguu    ucua      a
a uu          ac            uuac    acuuca 


Annotation confidence Not enough data
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Genome context
chr7: 36370118-36370203 [-]

Database links

Mature mtr-miR164c

Accession MIMAT0011102
Description Medicago truncatula mtr-miR164c mature miRNA
Sequence 6 - UGGAGAAGCAGGGCACGUGCA - 26
Evidence experimental
454 [2], Northern [2]

References

  1. PubMed ID: 19555436
    Cloning and characterization of small RNAs from Medicago truncatula reveals four novel legume-specific microRNA families
    "Jagadeeswaran G, Zheng Y, Li YF, Shukla LI, Matts J, Hoyt P, Macmil SL, Wiley GB, Roe BA, Zhang W, Sunkar R"
    "New Phytol (2009) 184:85-98


  2. "Bonnet E"
    (2007) None: