miRBase entry: ghr-MIR156b

Stem-loop ghr-MIR156b


Accession
MI0005639
Description
Gossypium hirsutum ghr-MIR156b precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
33 open access papers mention ghr-MIR156b
(151 sentences)

Sequence

ggUGACAGAAGAGAGUGAGCACacaggguacuuucuugcaugcuugagccuuucaugcuugaagcucugcgugcucacccucuaucugucauccacuuuucucucucucucuc
(((((((((((((.((((((((.((((((...(((..(((((...........)))))..))))))))).)))))))).)))).)))))))))....................

Structure
--------------------         -    A        a      acu   uu     cuug 
                    ggUGACAGA AGAG GUGAGCAC cagggu   uuc  gcaug    a
                    ||||||||| |||| |||||||| ||||||   |||  |||||    g
                    cuacugucu ucuc cacucgug gucucg   aag  cguac    c
cucucucucucucuuuucac         a    c        c      ---   uu     uuuc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ghr-miR156b

Accession MIMAT0005807
Description Gossypium hirsutum ghr-miR156b mature miRNA
Sequence 3 - UGACAGAAGAGAGUGAGCAC - 22
Evidence not_experimental

References

  1. PubMed ID: 18603441
    Identification of micro-RNAs in cotton
    "Khan Barozai MY, Irfan M, Yousaf R, Ali I, Qaisar U, Maqbool A, Zahoor M, Rashid B, Hussnain T, Riazuddin S"
    "Plant Physiol Biochem (2008) 46:739-751