Stem-loop pta-MIR156b

Accession

MI0005777

Description

Pinus taeda pta-MIR156b precursor miRNA

Gene family

MIPF0000008; MIR156

Sequence

gaugaCAGAAGAUAGAGAGCACAACcgcucagaugccggcacucugcguuugagguguaugugcucucguugauuuugucauc
((((((((((....(((((((((((..(((((((((.(.....).)))))))))..)).))))))))).....))))))))))

Structure

          -GAUA         -  cg         c g 
gaugaCAGAA     GAGAGCACA AC  cucagaugc g c
||||||||||     ||||||||| ||  ||||||||| | a
cuacuguuuu     cucucgugu ug  gaguuugcg c c
          aguug         a  ug         u u 

Annotation confidence Not enough data

Genome context

Unknown

Mature pta-miR156b

• Accession: MIMAT0004989
• Description: Pinus taeda pta-miR156b mature miRNA
• Sequence: 6 - CAGAAGAUAGAGAGCACAAC - 25
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17635765
   MicroRNAs in loblolly pine (Pinus taeda L.) and their association with fusiform rust gall development
   "Lu S, Sun YH, Amerson H, Chiang VL"
   "Plant J (2007) 51:1077-1098