miRBase entry: pta-MIR166a

Stem-loop pta-MIR166a


Accession
MI0005782
Description
Pinus taeda pta-MIR166a precursor miRNA
Gene family
MIPF0000004; MIR166


Sequence

uugauugaggggaauguugucuggcucgacuucauccggauuugggcuccaauguucggaugccgUCGGACCAGGCUUCAUUCCCCccaaucgg
.((((((.((((((((..((((((.(((((..(((((((((((((...)))).)))))))))..))))).))))))..)))))))).)))))).

Structure
u      a        uu      c     uu         -    g 
 ugauug ggggaaug  gucugg ucgac  cauccggau uugg  
 |||||| ||||||||  |||||| |||||  ||||||||| |||| c
 gcuaac CCCCUUAC  CGGACC GGCUg  guaggcuug aacc  
g      c        UU      A     cc         u    u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pta-miR166a

Accession MIMAT0004993
Description Pinus taeda pta-miR166a mature miRNA
Sequence 66 - UCGGACCAGGCUUCAUUCCCC - 86
Evidence not_experimental

References

  1. PubMed ID: 17635765
    MicroRNAs in loblolly pine (Pinus taeda L.) and their association with fusiform rust gall development
    "Lu S, Sun YH, Amerson H, Chiang VL"
    "Plant J (2007) 51:1077-1098