Stem-loop pta-MIR390

Accession

MI0005787

Description

Pinus taeda pta-MIR390 precursor miRNA

Gene family

MIPF0000101; MIR390

Sequence

aauuaugAAGCCCAGGAUGGAUAGCGCCagccccacuugaaauuugcagugggcgcuaucccucugagcuuuguaauu
(((((((((((.((((..((((((((((.((..((.........))..)).)))))))))).)))).)))))))))))

Structure

           C    AU          a  cc  cuu 
aauuaugAAGC CAGG  GGAUAGCGCC gc  ca   g
||||||||||| ||||  |||||||||| ||  ||   a
uuaauguuucg gucu  ccuaucgcgg ug  gu   a
           a    -c          g  ac  uua 

Annotation confidence Not enough data

Genome context

Unknown

Mature pta-miR390

• Accession: MIMAT0004998
• Description: Pinus taeda pta-miR390 mature miRNA
• Sequence: 8 - AAGCCCAGGAUGGAUAGCGCC - 28
• Evidence: not_experimental

References

1. PubMed ID: 17635765
   MicroRNAs in loblolly pine (Pinus taeda L.) and their association with fusiform rust gall development
   "Lu S, Sun YH, Amerson H, Chiang VL"
   "Plant J (2007) 51:1077-1098