Stem-loop pta-MIR951

Accession

MI0005801

Description

Pinus taeda pta-MIR951 precursor miRNA

Gene family

MIPF0001160; MIR951

Sequence

gaagcgauggUGUUCUUGACGUCUGGACCACgaggguuugcuuuacguugggcaugaagaaacaaucaucuaccgcgguucagucaucaagaacaccuuugcuuu
(((((((.(((((((((((.(.(((((((.(((((((((.(((((.((...)).))))))))).....)))..)).))))))).).))))))))))).)))))))

Structure

       u           C U       A  --   -----    g     c  u 
gaagcga ggUGUUCUUGA G CUGGACC Cg  agg     guuu cuuua gu  
||||||| ||||||||||| | ||||||| ||  |||     |||| ||||| || g
uuucguu ccacaagaacu c gacuugg gc  ucu     caaa gaagu cg  
       u           a u       c  ca   acuaa    -     a  g 

Annotation confidence Not enough data

Genome context

Unknown

Mature pta-miR951

• Accession: MIMAT0005012
• Description: Pinus taeda pta-miR951 mature miRNA
• Sequence: 11 - UGUUCUUGACGUCUGGACCAC - 31
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17635765
   MicroRNAs in loblolly pine (Pinus taeda L.) and their association with fusiform rust gall development
   "Lu S, Sun YH, Amerson H, Chiang VL"
   "Plant J (2007) 51:1077-1098