miRBase entry: dme-mir-974

Stem-loop dme-mir-974


Accession
MI0005831
Description
Drosophila melanogaster dme-mir-974 precursor miRNA


Sequence

126 reads, 81 reads per million, 19 experiments
caauugucaccggucauguccuccAAGCGAGCAAAGAAGUAGUAUUuguguuuccaagagcaaaUAUAACUUCAUUGGAAGCUAAGuggauuugcccaaau
...........((.((.((((.(..(((...(((.(((((.((((((((..........)))))))).))))).)))...)))..).)))).)).))....

Structure
caauugucacc  u  u    u cA   GAG   A     A        guuu 
           gg ca gucc c  AGC   CAA GAAGU GUAUUugu    c
           || || |||| |  |||   ||| ||||| ||||||||     
           cc gu uagg G  UCG   GUU CUUCA UAUaaacg    c
-------uaaa  c  u    u AA   AAG   A     A        agaa 


Annotation confidence High
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Genome context
chrX: 19551678-19551778 [+]
Clustered miRNAs
9 other miRNAs are < 10 kb from dme-mir-974
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dme-miR-974-5p

Accession MIMAT0005490
Description Drosophila melanogaster dme-miR-974-5p mature miRNA
Sequence 25 - AAGCGAGCAAAGAAGUAGUAUU - 46
Evidence experimental
454 [1]
Database links
Predicted targets

Mature dme-miR-974-3p

Accession MIMAT0020871
Description Drosophila melanogaster dme-miR-974-3p mature miRNA
Sequence 65 - UAUAACUUCAUUGGAAGCUAAG - 86
Evidence not_experimental
Database links

References

  1. PubMed ID: 17989254
    Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
    "Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC"
    "Genome Res (2007) 17:1850-1864