Stem-loop dme-mir-982

Accession

MI0005839

Description

Drosophila melanogaster dme-mir-982 precursor miRNA mir-982

Gene
family

RF04056; mir-982

Literature search

4 open access papers mention dme-mir-982
(39 sentences)

Sequence

1274 reads, 74 reads per million, 46 experiments

cgaaaucauguuagaUCCUGGACAAAUAUGAAGUAAAUuguuuuuaugcaucaaUUACUUGAUAUUCAUCCUUGAAcuaaaugguuuuagagc
.((((((((.((((.((..(((..(((((.((((((..(((......)))....)))))).)))))..)))..)).)))))))))))).....

Structure

----c        g    a  CU   CA     G      --AU   uu 
     gaaaucau uuag UC  GGA  AAUAU AAGUAA    ugu  u
     |||||||| |||| ||  |||  ||||| ||||||    |||   
     uuuuggua aauc AG  CCU  UUAUA UUCAUU    acg  u
cgaga        -    A  UU   AC     G      aacu   ua 

Annotation confidence Medium

Genome context

chrX: 4365806-4365898 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from dme-mir-982

Mature dme-miR-982-5p

• Accession: MIMAT0005498
• Description: Drosophila melanogaster dme-miR-982-5p mature miRNA
• Sequence: 16 - UCCUGGACAAAUAUGAAGUAAAU - 38
• Evidence: experimental ; 454 [1]

Mature dme-miR-982-3p

• Accession: MIMAT0020879
• Description: Drosophila melanogaster dme-miR-982-3p mature miRNA
• Sequence: 55 - UUACUUGAUAUUCAUCCUUGAA - 76
• Evidence: not_experimental

References

1. PubMed ID: 17989254
   Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
   "Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC"
   "Genome Res (2007) 17:1850-1864