miRBase entry: dme-mir-984

Stem-loop dme-mir-984


Accession
MI0005842
Description
Drosophila melanogaster dme-mir-984 precursor miRNA

Literature search
3 open access papers mention dme-mir-984
(6 sentences)

Sequence

4394 reads, 620 reads per million, 49 experiments
agaaacaaauuucauUGAGGUAAAUACGGUUGGAAUUUugucuuuuaacuauaaAUCCAACCGAAUUUGGCUCGgcgaaauuuuucaguu
.((((..((((((.(((((.(((((.((((((((..(((((.........))))))))))))).))))).))))).))))))))))....

Structure
---a    ca      a     G     A        AU     cuu 
    gaaa  aauuuc uUGAG UAAAU CGGUUGGA  UUugu   u
    ||||  |||||| ||||| ||||| ||||||||  |||||   u
    cuuu  uuaaag gGCUC GUUUA GCCAACCU  Aaaua   a
uuga    --      c     G     A        --     uca 


Annotation confidence High
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Genome context
chrX: 4368646-4368735 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from dme-mir-984
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dme-miR-984-5p

Accession MIMAT0005500
Description Drosophila melanogaster dme-miR-984-5p mature miRNA
Sequence 16 - UGAGGUAAAUACGGUUGGAAUUU - 38
Evidence experimental
454 [1]
Database links
Predicted targets

Mature dme-miR-984-3p

Accession MIMAT0020881
Description Drosophila melanogaster dme-miR-984-3p mature miRNA
Sequence 55 - AUCCAACCGAAUUUGGCUCG - 74
Evidence not_experimental
Database links

References

  1. PubMed ID: 17989254
    Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
    "Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC"
    "Genome Res (2007) 17:1850-1864