miRBase entry: dme-mir-992

Stem-loop dme-mir-992


Accession
MI0005852
Description
Drosophila melanogaster dme-mir-992 precursor miRNA
Gene family
MIPF0000914; mir-992

Literature search
3 open access papers mention dme-mir-992
(6 sentences)

Sequence

2709 reads, 1298 reads per million, 20 experiments
auuuucccaagugccUGGUAUCAGCAAAGUGUUAUUUuuuauguuuauguaaAGUACACGUUUCUGGUACUAAGuacuucgagaaaguuacc
(((((((.((((((.(((((((((.(((((((.(((((.(((....))).))))))))).)))))))))))).)))))).).))))))....

Structure
----      - c      c         C   -    U     u   g 
    auuuuc c aagugc UGGUAUCAG AAA GUGU AUUUu uau u
    |||||| | |||||| ||||||||| ||| |||| ||||| |||  
    ugaaag g uucauG AUCAUGGUC UUU CACA UGAaa gua u
ccau      a c      A         -   G    -     u   u 


Annotation confidence High
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Genome context
chr2R: 20585314-20585405 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from dme-mir-992
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dme-miR-992-3p

Accession MIMAT0005510
Description Drosophila melanogaster dme-miR-992-3p mature miRNA
Sequence 53 - AGUACACGUUUCUGGUACUAAG - 74
Evidence experimental
454 [1]
Database links
Predicted targets

Mature dme-miR-992-5p

Accession MIMAT0020891
Description Drosophila melanogaster dme-miR-992-5p mature miRNA
Sequence 16 - UGGUAUCAGCAAAGUGUUAUUU - 37
Evidence not_experimental
Database links

References

  1. PubMed ID: 17989254
    Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
    "Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC"
    "Genome Res (2007) 17:1850-1864