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miRBase |
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Stem-loop sequence dme-mir-996 |
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Accession | MI0005857 (change log) | |||||
Description | Drosophila melanogaster miR-996 stem-loop | |||||
Gene family | MIPF0000449; mir-996 | |||||
Literature search |
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4 open access papers mention dme-mir-996 | |||||
Stem-loop |
u u u c a - g ugguuca 5' cugacuc auuu gu ggcga caugga ucuagu cacgg u ||||||| |||| || ||||| |||||| |||||| ||||| 3' gacuggg ugaa ua cugcu guacuu agauca gugcu g - u u u c u - ugaauua |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence dme-miR-996-5p |
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Accession | MIMAT0020895 |
Sequence |
19 - gcgaacauggaucuagugcacg - 40 |
Deep sequencing | 41672 reads, 49 experiments |
Evidence | not experimental |
Database links |
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Mature sequence dme-miR-996-3p |
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Accession | MIMAT0005515 |
Previous IDs | dme-miR-996 |
Sequence |
61 - ugacuagauuucaugcucgucu - 82 |
Deep sequencing | 681390 reads, 49 experiments |
Evidence | experimental; 454 [1-2], Illumina [2] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:17989254
"Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs"
Genome Res. 17:1850-1864(2007).
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2 |
PMID:17989255
"Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes"
Genome Res. 17:1865-1879(2007).
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