miRBase entry: mmu-mir-582

Stem-loop mmu-mir-582


Accession
MI0006127
Symbol
MGI: Mir582
Description
Mus musculus mmu-mir-582 precursor miRNA
Gene family
MIPF0000417; mir-582

Literature search
9 open access papers mention mmu-mir-582
(38 sentences)

Sequence

12761 reads, 140 reads per million, 82 experiments
acucuuuggAUACAGUUGUUCAACCAGUUACuaaucuaacuaauugUAACCUGUUGAACAACUGAACccaaagggugcaaa
(((((((((...((((((((((((..(((((..............)))))..))))))))))))...))))))))).....

Structure
-----         AUA            CA     uaaucu 
     acucuuugg   CAGUUGUUCAAC  GUUAC      a
     |||||||||   ||||||||||||  |||||       
     ugggaaacc   GUCAACAAGUUG  CAAUg      a
aaacg         CAA            UC     uuaauc 


Annotation confidence High
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Genome context
chr13: 109324744-109324824 [+]

Database links

Mature mmu-miR-582-5p

Accession MIMAT0005291
Description Mus musculus mmu-miR-582-5p mature miRNA
Sequence 10 - AUACAGUUGUUCAACCAGUUAC - 31
Evidence experimental
cloned [1], Illumina [2-3]
Database links
Predicted targets

Mature mmu-miR-582-3p

Accession MIMAT0005292
Description Mus musculus mmu-miR-582-3p mature miRNA
Sequence 47 - UAACCUGUUGAACAACUGAAC - 67
Evidence experimental
cloned [1], Illumina [2-3]
Database links
Predicted targets

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 20215419
    MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
    "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
    "Mol Hum Reprod (2010) 16:463-471

  3. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009