miRBase entry: xtr-mir-31b

Stem-loop xtr-mir-31b


Accession
MI0006264
Description
Xenopus tropicalis xtr-mir-31b precursor miRNA

Literature search
1 open access papers mention xtr-mir-31b
(1 sentences)

Sequence

guaaccacuaGGCAAGAUGCUGGCAAGCUaauuaccuuuuaccuggcuuuccaucucagucuagcagcauuauugg
.......((((((.(((...(((.((((((.............)))))).))))))..))))))............

Structure
-----guaacca      -A   UGC   C      auuac 
            cuaGGC  AGA   UGG AAGCUa     c
            ||||||  |||   ||| ||||||     u
            gaucug  ucu   acc uucggu     u
gguuauuacgac      ac   ---   u      ccauu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr8: 109552679-109552754 [+]

Database links

Mature xtr-miR-31b

Accession MIMAT0005562
Description Xenopus tropicalis xtr-miR-31b mature miRNA
Sequence 11 - GGCAAGAUGCUGGCAAGCU - 29
Evidence not_experimental

References

  1. PubMed ID: 18032731
    Xenopus microRNA genes are predominantly located within introns and are differentially expressed in adult frog tissues via post-transcriptional regulation
    "Tang GQ, Maxwell ES"
    "Genome Res (2008) 18:104-112