Stem-loop sequence hsa-mir-1207

Accession

MI0006340 (change log)

Symbol

HGNC:MIR1207

Description

Homo sapiens miR-1207 stem-loop

Gene family

MIPF0000596; mir-1207

Literature search

37 open access papers mention hsa-mir-1207
(67 sentences)

Stem-loop

        ---    -gca      c  gga     ug     -    gg 
5' gcagg   gcug    gggagg ug   ggggc  gcugg gucu  u
   |||||   ||||    |||||| ||   |||||  ||||| ||||   
3' ugucu   cgac    uucuuu ac   ucccg  cgacu cggg  a
        uca    agaa      -  ---     gu     a    ug 

Deep sequencing

50 reads, 0 reads per million, 31 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr8: 128049152-128049238 [+]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:MIR1207
• HGNC:MIR1207
• miRBase Tracker:MI0006340

Mature sequence hsa-miR-1207-5p

• Accession: MIMAT0005871
• Sequence: 8 - uggcagggaggcugggagggg - 28
• Deep sequencing: 26 reads, 20 experiments
• Evidence: experimental; Northern [1]
• Predicted targets:
  • TargetMiner:hsa-miR-1207-5p
  • TargetScanVert:hsa-miR-1207-5p
  • miRDB:hsa-miR-1207-5p
  • microrna.org:hsa-miR-1207-5p

Mature sequence hsa-miR-1207-3p

• Accession: MIMAT0005872
• Sequence: 52 - ucagcuggcccucauuuc - 69
• Evidence: experimental; Northern [1]
• Predicted targets:
  • TargetMiner:hsa-miR-1207-3p
  • TargetScanVert:hsa-miR-1207-3p
  • miRDB:hsa-miR-1207-3p
  • microrna.org:hsa-miR-1207-3p

References

1. PMID:18314482 "The identification of microRNAs in a genomically unstable region of human chromosome 8q24" Huppi K, Volfovsky N, Runfola T, Jones TL, Mackiewicz M, Martin SE, Mushinski JF, Stephens R, Caplen NJ Mol Cancer Res. 6:212-221(2008).