miRBase entry: mml-mir-506

Stem-loop mml-mir-506


Accession
MI0006610
Description
Macaca mulatta mml-mir-506 precursor miRNA
Gene family
MIPF0000130; mir-506

Literature search
1 open access papers mention mml-mir-506
(1 sentences)

Sequence

23183 reads, 1132 reads per million, 9 experiments
ugucuagugccguuauguguagugccuUAUUCAGGAAGGUGUUACUUaauauauuaauauuugUAAGGCACCCUUCUGAGUAGAguaaugugcaacauggacaucauuu
((((((((((((((((...........(((((((((.((((((((..(((((....))))).)))..))))).)))))))))..)))))).)).)).))))))......

Structure
------      -  -  -      guguagugccu         A     --   UU     a 
      ugucua gu gc cguuau           UAUUCAGGA GGUGU  UAC  aauau u
      |||||| || || ||||||           ||||||||| |||||  |||  |||||  
      acaggu ca cg guaaug           AUGAGUCUU CCACG  AUg  uuaua u
uuuacu      a  a  u      ---------AG         C     GA   -u     a 


Annotation confidence High
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Genome context
chrX: 140946806-140946914 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from mml-mir-506
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-506-3p

Accession MIMAT0005762
Description Macaca mulatta mml-miR-506-3p mature miRNA
Sequence 64 - UAAGGCACCCUUCUGAGUAGA - 84
Evidence experimental
Illumina [2]

Mature mml-miR-506-5p

Accession MIMAT0026745
Description Macaca mulatta mml-miR-506-5p mature miRNA
Sequence 28 - UAUUCAGGAAGGUGUUACUU - 47
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 17416744
    Rapid evolution of an X-linked microRNA cluster in primates
    "Zhang R, Peng Y, Wang W, Su B"
    "Genome Res (2007) 17:612-617

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45