miRBase entry: hsa-mir-1197

Stem-loop hsa-mir-1197


Accession
MI0006656
Symbol
HGNC: MIR1197
Description
Homo sapiens hsa-mir-1197 precursor miRNA
Gene family
MIPF0000126; mir-379

Literature search
4 open access papers mention hsa-mir-1197
(4 sentences)

Sequence

224 reads, 14 reads per million, 65 experiments
acuuccugguauuugaagaugcgguugaccaugguguguacgcuuuauuugugacgUAGGACACAUGGUCUACUUCUucucaauauca
......(((((((.(((((...(((.(((((((.(((.(((((.........).))))..)))))))))).))))))))..)))))))

Structure
acuucc       -u     ugc   u       g   -g    - uuu 
      ugguauu  gaaga   ggu gaccaug ugu  uacg c   a
      |||||||  |||||   ||| ||||||| |||  |||| |   u
      acuauaa  cuUCU   UCA CUGGUAC ACA  AUgc g   u
------       cu     ---   U       -   GG    a ugu 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Afanasyeva et al. refer to this sequence using the internal identifier MYCNSC_NB5_330 [1]. Some additional sequences reported in [1] do not meet miRBase requirements for miRNA identification.

Genome context
chr14: 101025564-101025651 [+]
Clustered miRNAs
12 other miRNAs are < 10 kb from hsa-mir-1197
Name Accession Chromosome Start End Strand Confidence




Disease association
hsa-mir-1197 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-1197

Accession MIMAT0005955
Description Homo sapiens hsa-miR-1197 mature miRNA
Sequence 57 - UAGGACACAUGGUCUACUUCU - 77
Evidence experimental
cloned [1]
Database links
Predicted targets

References

  1. PubMed ID: 18230126
    New miRNAs cloned from neuroblastoma
    "Afanasyeva EA, Hotz-Wagenblatt A, Glatting KH, Westermann F"
    "BMC Genomics (2008) 9:52