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miRBase |
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Stem-loop sequence osa-MIR444e |
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Accession | MI0006977 (change log) | ||
Description | Oryza sativa miR444e stem-loop | ||
Gene family | MIPF0000402; MIR444 | ||
Literature search |
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23 open access papers mention osa-MIR444e | ||
Stem-loop |
u c a a c -a c ug -au a 5' gguuu guaa caggggca uaagcu gaggca caacugcauaacuugcg gaaa u uugg g u ||||| |||| |||||||| |||||| |||||| ||||||||||||||||| |||| | |||| | g 3' ccaaa cguu guuuccgu auucga cuccgu guugacguauugaacgc uuuu a aacc c a u u c a c cg - gu guu u |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Database links |
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Mature sequence osa-miR444e |
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Accession | MIMAT0005975 |
Sequence |
99 - ugcaguugcugccucaagcuu - 119 |
Deep sequencing | 1408 reads, 2 experiments |
Evidence | experimental; MPSS [1], Northern [1], cloned [2] |
Database links |
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References |
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1 |
PMID:18353984
"Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs)"
Proc Natl Acad Sci U S A. 105:4951-4956(2008).
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2 |
PMID:18312648
"Identification of novel and candidate miRNAs in rice by high throughput sequencing"
BMC Plant Biol. 8:25(2008).
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