miRBase entry: osa-MIR1438

Stem-loop osa-MIR1438


Accession
MI0007025
Description
Oryza sativa osa-MIR1438 precursor miRNA


Sequence

guugugauauaagguuuuAGGGUAAUUUUAUCAUUUUUAAgaaaacaaaauuuaauaccuucagauauucgguaucuauguaaaaaauuuuuagaucccucaauaaaauuuaauaccuaaaaucuaaacguauuaaauuuuguuuucuuaaaaauuauaaaauuacccuaauacauaauaccucaau
((((.(.(((...((.(((((((((((((((.((((((((((((((((((((((((((.((.((((.((.(((((.........(((((((.............))))))).))))).)).)))).)).)))))))))))))))))))))))))).))))))))))))))).))...))).).))))

Structure
    u a   aag  u               C                          c  c    a  c     cuauguaaa       uagau 
guug g uau   gu uuAGGGUAAUUUUAU AUUUUUAAgaaaacaaaauuuaauac uu agau uu gguau         aaauuuu     c
|||| | |||   || ||||||||||||||| |||||||||||||||||||||||||| || |||| || |||||         |||||||     c
uaac c aua   ca aaucccauuaaaaua uaaaaauucuuuuguuuuaaauuaug aa ucua aa ccaua         uuuaaaa     c
    u c   aua  u               u                          c  a    a  u     --------a       uaacu 


Annotation confidence Not enough data
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Genome context
Chr10: 8429612-8429798 [+]

Database links

Mature osa-miR1438

Accession MIMAT0005989
Description Oryza sativa osa-miR1438 mature miRNA
Sequence 19 - AGGGUAAUUUUAUCAUUUUUAA - 40
Evidence experimental
cloned [1]

References

  1. PubMed ID: 18312648
    Identification of novel and candidate miRNAs in rice by high throughput sequencing
    Sunkar R, Zhou X, Zheng Y, Zhang W, Zhu JK
    BMC Plant Biol (2008) 8:25