Stem-loop sequence ptc-MIR171j

Accession

MI0007034 (change log)

Description

Populus trichocarpa miR171j stem-loop

Gene family

MIPF0000104; MIR171_2

Literature search

6 open access papers mention ptc-MIR171j
(11 sentences)

Stem-loop

        ag   u  c           c      u     u  -auuu  au 
5' gaagc  aca gg gugguauugau cggcuc ucuuc gu     gc  c
   |||||  ||| || ||||||||||| |||||| ||||| ||     ||  a
3' cuucg  ugu uc cacuauaacua gccgag agaag cg     ug  g
        ca   -  u           a      c     u  cuuuu  aa 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Database links

• RNAcentral:URS00007B1CF8_3694
• miRBase Tracker:MI0007034

Mature sequence ptc-miR171j

• Accession: MIMAT0005996
• Sequence: 70 - cgagccgaaucaauaucacu - 89
• Evidence: experimental; cloned [1]

References

1. PMID:18363789 "Stress-responsive microRNAs in Populus" Lu S, Sun YH, Chiang VL Plant J. 55:131-151(2008).