Stem-loop sequence ptc-MIR1444a

Accession

MI0007037 (change log)

Description

Populus trichocarpa miR1444a stem-loop

Gene family

MIPF0000461; MIR1444

Literature search

3 open access papers mention ptc-MIR1444a
(116 sentences)

Stem-loop

             u               a    u    a uu uuu 
5' guuuaucacu gaauguugaccgaau ugga gaaa g  g   u
   |||||||||| ||||||||||||||| |||| |||| |  |    
3' cgaguaguga cuuguaacuggcuua accu cuuu c  u   c
             c               c    c    - cu ugu 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Poptr2_0; GCA_000002775.2): CM000344.2: 9316673-9316761 [-]
• Overlapping transcripts:

  intergenic

Database links

• RNAcentral:URS00007A6061_3694
• miRBase Tracker:MI0007037

Mature sequence ptc-miR1444a

• Accession: MIMAT0005999
• Sequence: 59 - uccacauucggucaauguuc - 78
• Evidence: experimental; cloned [1]

References

1. PMID:18363789 "Stress-responsive microRNAs in Populus" Lu S, Sun YH, Chiang VL Plant J. 55:131-151(2008).