Stem-loop sequence ptc-MIR1445

Accession

MI0007040 (change log)

Description

Populus trichocarpa miR1445 stem-loop

Stem-loop

          -   -  cu     cc            uu   acaauugaaugaaccuuguuugcaa 
5' aagcuaa uua au  gauuu  cuaguuuauaag  guu                         g
   ||||||| ||| ||  |||||  ||||||||||||  |||                          
3' uuugguu agu ua  cuaaa  gaucagauguuc  uaa                         c
          u   c  au     aa            cc   auaccacccgccguugauuaggaua 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Poptr2_0; GCA_000002775.2): CM000348.2: 6339575-6339704 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0007040

Mature sequence ptc-miR1445

• Accession: MIMAT0006002
• Sequence: 93 - ucccuuguagacuagaaaaa - 112
• Evidence: experimental; cloned [1]

References

1. PMID:18363789 "Stress-responsive microRNAs in Populus" Lu S, Sun YH, Chiang VL Plant J. 55:131-151(2008).