Stem-loop sequence ptc-MIR1446d

AccessionMI0007045 (change log)
DescriptionPopulus trichocarpa miR1446d stem-loop
Gene family MIPF0000459; MIR1446
Literature search

1 open access papers mention ptc-MIR1446d
(4 sentences)

Stem-loop 
        uuc        u     -    a        u u   ---u    c  a 
5' ccaac   uucugaac cucuc ccuc acugcuac c aga    cuug ca u
   |||||   |||||||| ||||| |||| |||||||| | |||    |||| || c
3' gguug   aggacuug gagag ggag ugacgaug g ucu    gaac gu c
        uaa        -     u    c        u -   uugu    u  c
Get sequence
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (Poptr2_0; GCA_000002775.2) Overlapping transcripts
CM000351.2: 12329283-12329387 [-]
intergenic
Clustered miRNAs
< 10kb from ptc-MIR1446d
ptc-MIR477cCM000351.2: 12329499-12329608 [-]
ptc-MIR1446dCM000351.2: 12329283-12329387 [-]
Database links

Mature sequence ptc-miR1446d

Accession MIMAT0006007
Sequence

9 -  

uucugaacucucucccucaa

 - 28

Get sequence
Evidence experimental; cloned [1]

References

1
PMID:18363789 "Stress-responsive microRNAs in Populus" Lu S, Sun YH, Chiang VL Plant J. 55:131-151(2008).