Stem-loop sequence ptc-MIR1446e

AccessionMI0007046 (change log)
DescriptionPopulus trichocarpa miR1446e stem-loop
Gene family MIPF0000459; MIR1446
Literature search

1 open access papers mention ptc-MIR1446e
(4 sentences)

Stem-loop 
        u         -       -    a        --ucuaga     uuaa 
5' ccaac uuuucugaa cucucuc ccuc acugcuau        gcuug    u
   ||||| ||||||||| ||||||| |||| ||||||||        |||||    c
3' gguug aaaaggcuu gggggag ggag ugacgaug        ugaac    c
        u         u       c    c        ucccuuug     uguu
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Poptr2_0; GCA_000002775.2) Overlapping transcripts
CM000351.2: 12482366-12482472 [+]
intergenic
Clustered miRNAs
< 10kb from ptc-MIR1446e
ptc-MIR477dCM000351.2: 12480540-12480666 [+]
ptc-MIR1446eCM000351.2: 12482366-12482472 [+]
Database links

Mature sequence ptc-miR1446e

Accession MIMAT0006008
Sequence

9 -  

uucugaacucucucccucaa

 - 28

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Evidence experimental; cloned [1]

References

1
PMID:18363789 "Stress-responsive microRNAs in Populus" Lu S, Sun YH, Chiang VL Plant J. 55:131-151(2008).