Stem-loop sequence ptc-MIR1450

Accession

MI0007050 (change log)

Description

Populus trichocarpa miR1450 stem-loop

Literature search

1 open access papers mention ptc-MIR1450
(6 sentences)

Stem-loop

                cag       gu      c             c             ugucu     gauuug 
5' gagucaauuaggu   uugugua  cugacc gagccauugaaga aaucauuuguugg     cauug      u
   |||||||||||||   |||||||  |||||| ||||||||||||| |||||||||||||     |||||       
3' cucgguugaucua   aacacau  gacugg cucgguaacuucu uuaguaaacaacc     gugac      u
                acg       ug      -             c             uauuu     agucca 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Poptr2_0; GCA_000002775.2): CM000340.2: 21413342-21413492 [-]
• Overlapping transcripts:

  intergenic

Database links

• RNAcentral:URS00007A291C_3694
• miRBase Tracker:MI0007050

Mature sequence ptc-miR1450

• Accession: MIMAT0006012
• Sequence: 110 - uucaauggcucggucagguuac - 131
• Evidence: experimental; cloned [1]

References

1. PMID:18363789 "Stress-responsive microRNAs in Populus" Lu S, Sun YH, Chiang VL Plant J. 55:131-151(2008).