miRBase entry: odi-mir-1477

Stem-loop odi-mir-1477


Accession
MI0007088
Description
Oikopleura dioica odi-mir-1477 precursor miRNA


Sequence

gacguguauuuggcaUGUGCAAAGCCCUAACAUUUCUAguagcccggggggaguguauagaaauggagggaguagcacccgccaagcguuugagcuuucgaca
(((((....(((((..((((.(..((((..((((((((...((((....)).))...)))))))).))))..).))))..)))))))))).............

Structure
-------------     guau     aU    A AG    AA        gua  -  g 
             gacgu    uuggc  GUGC A  CCCU  CAUUUCUA   gc cc g
             |||||    |||||  |||| |  ||||  ||||||||   || ||  
             uugcg    aaccg  cacg u  ggga  guaaagau   ug gg g
acagcuuucgagu     ----     cc    a ga    -g        aug  a  g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature odi-miR-1477

Accession MIMAT0006029
Description Oikopleura dioica odi-miR-1477 mature miRNA
Sequence 16 - UGUGCAAAGCCCUAACAUUUCUA - 38
Evidence experimental
cloned [1]

References

  1. PubMed ID: 18339653
    Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
    "Fu X, Adamski M, Thompson EM"
    "Mol Biol Evol (2008) 25:1067-1080