miRBase entry: odi-mir-1483

Stem-loop odi-mir-1483


Accession
MI0007094
Description
Oikopleura dioica odi-mir-1483 precursor miRNA


Sequence

caacccaguuucucgCGGCAGUGAGUCGAUAGCGCCCUUUcggcguaucuagaaaauuuucgaaAGGGCCAUCGCCUAUAUCUGCCCAaagaaacugggaaua
...((((((((((...(((((..((.((((.(.((((((((((................))))))))))))))).))....)))))...))))))))))....

Structure
-caa          cgC     --UG  U    A C          cguaucu 
    cccaguuucu   GGCAG    AG CGAU G GCCCUUUcgg       a
    ||||||||||   |||||    || |||| | ||||||||||        
    gggucaaaga   CCGUC    UC GCUA C CGGGAaagcu       g
auaa          aAC     UAUA  C    - -          uuuaaaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature odi-miR-1483-5p

Accession MIMAT0006035
Description Oikopleura dioica odi-miR-1483-5p mature miRNA
Sequence 16 - CGGCAGUGAGUCGAUAGCGCCCUUU - 40
Evidence experimental
cloned [1]

Mature odi-miR-1483-3p

Accession MIMAT0006036
Description Oikopleura dioica odi-miR-1483-3p mature miRNA
Sequence 65 - AGGGCCAUCGCCUAUAUCUGCCCA - 88
Evidence experimental
cloned [1]

References

  1. PubMed ID: 18339653
    Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
    "Fu X, Adamski M, Thompson EM"
    "Mol Biol Evol (2008) 25:1067-1080