miRBase entry: odi-mir-1484

Stem-loop odi-mir-1484


Accession
MI0007095
Description
Oikopleura dioica odi-mir-1484 precursor miRNA


Sequence

ucgcagggaccggucgaccauaaugcguuguuugaccuuuuggcuggcugaagccaggaacgggUGAAACUUCGUAGAUUUGGUCACUcggcucuagaucgag
((..((((.(((((.(((((...((((..((((.(((((((((((......)))))))...)))).))))..))))....))))))).))))))).)).....

Structure
-----  gc    a   -  c     -uaa    uu    g    ---       gg 
     uc  aggg ccg gu gacca    ugcg  guuu accu   uuuggcu  c
     ||  |||| ||| || |||||    ||||  |||| ||||   |||||||   
     ag  ucuc ggc CA CUGGU    AUGC  CAAA Uggg   ggaccga  u
gagcu  -a    -   U  -     UUAG    UU    G    caa       ag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature odi-miR-1484

Accession MIMAT0006037
Description Oikopleura dioica odi-miR-1484 mature miRNA
Sequence 65 - UGAAACUUCGUAGAUUUGGUCACU - 88
Evidence experimental
cloned [1]

References

  1. PubMed ID: 18339653
    Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
    "Fu X, Adamski M, Thompson EM"
    "Mol Biol Evol (2008) 25:1067-1080