miRBase entry: odi-mir-1499

Stem-loop odi-mir-1499


Accession
MI0007121
Description
Oikopleura dioica odi-mir-1499 precursor miRNA


Sequence

cggcucgcgucgaggCACACCUUUACCAGUGCGCUGGagcgaaucgaaccugaaccagccgcaucgguuaaggugccacucgaccguaggaauaucauugua
...((((.((((((...((((((.(((.(((((((((..((.........))..)))).))))).))).))))))...)))))))).)).............

Structure
----------cgg  -  c      gCA      U   A     -    ag  aau 
             cu cg gucgag   CACCUU ACC GUGCG CUGG  cg   c
             || || ||||||   |||||| ||| ||||| ||||  ||   g
             ga gc cagcuc   guggaa ugg uacgc gacc  gu   a
auguuacuauaag  u  -      acc      u   c     c    aa  cca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature odi-miR-1499

Accession MIMAT0006059
Description Oikopleura dioica odi-miR-1499 mature miRNA
Sequence 16 - CACACCUUUACCAGUGCGCUGG - 37
Evidence experimental
cloned [1]

References

  1. PubMed ID: 18339653
    Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
    "Fu X, Adamski M, Thompson EM"
    "Mol Biol Evol (2008) 25:1067-1080