Stem-loop gma-MIR1507a

Accession

MI0007219

Description

Glycine max gma-MIR1507a precursor miRNA

Gene family

MIPF0000699; MIR1507

Literature search

21 open access papers mention gma-MIR1507a
(54 sentences)

Sequence

caguguuuggcagagguguauggagugagagaagggaaaggguauuuuccgauucugucguuacucucuucccucUCUCAUUCCAUACAUCGUCUGAcgaacguauc
....(((((.((((((((((((((((((((((.(((((((((((.....((((...)))).)))))).))))))))))))))))))))))).)))).))))).....

Structure

-cagu     g    -                  a     -      uuuuc    u 
     guuug caga gguguauggagugagaga gggaa agggua     cgau  
     ||||| |||| |||||||||||||||||| ||||| ||||||     |||| c
     caagc GUCU CUACAUACCUUACUCUcu cccuu ucucau     gcug  
cuaug     A    G                  -     c      ----u    u 

Annotation confidence Not enough data

Genome context

chr13: 27036567-27036673 [+]

Mature gma-miR1507a

• Accession: MIMAT0007365
• Description: Glycine max gma-miR1507a mature miRNA
• Sequence: 76 - UCUCAUUCCAUACAUCGUCUGA - 97
• Evidence: experimental ; 454 [1,3], cloned [2]

References

1. PubMed ID: 18402695
   Novel and nodulation-regulated microRNAs in soybean roots
   Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O
   BMC Genomics (2008) 9:160


2. PubMed ID: 19084500
   Identification and expression analysis of miRNAs from nitrogen-fixing soybean nodules
   "Wang Y, Li P, Cao X, Wang X, Zhang A, Li X"
   "Biochem Biophys Res Commun (2009) 378:799-803


3. PubMed ID: 21504877
   MicroRNAs in the shoot apical meristem of soybean
   "Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL"
   "J Exp Bot (2011) 62:2495-2506