Stem-loop sequence gma-MIR1512a

Accession

MI0007224 (change log)

Previous IDs

gma-MIR1512

Description

Glycine max miR1512 stem-loop

Gene family

MIPF0001291; MIR1512

Literature search

11 open access papers mention gma-MIR1512a
(25 sentences)

Stem-loop

   -uc     u c         a                 -  a   aaa 
5'    uugau c uaacugaaa uucuuaaaguauuccca uc ucg   u
      ||||| | ||||||||| ||||||||||||||||| || |||    
3'    aacua g auugacuuu aagaauuucguaagggu ag agu   g
   acu     c u         -                 u  a   aaa 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Glycine_max_v2.0; GCA_000004515.3): chr18: 56521611-56521705 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0007224

Mature sequence gma-miR1512a-5p

• Accession: MIMAT0007370
• Previous IDs: gma-miR1512a
• Sequence: 11 - uaacugaaaauucuuaaaguau - 32
• Evidence: experimental; 454 [1]

Mature sequence gma-miR1512a-3p

• Accession: MIMAT0032030
• Sequence: 66 - gcuuuaagaauuucaguuaug - 86
• Evidence: experimental; Illumina [2]

References

1. PMID:18402695 "Novel and nodulation-regulated microRNAs in soybean roots" Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O BMC Genomics. 9:160(2008).
2. PMID:24475082 "Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons" Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ PLoS One. 9:e86153(2014).