Stem-loop gma-MIR1515a

Accession

MI0007228

Description

Glycine max gma-MIR1515a precursor miRNA

Gene family

MIPF0001591; MIR1515

Literature search

11 open access papers mention gma-MIR1515a
(23 sentences)

Sequence

uaaauguucaUCAUUUUGCGUGCAAUGAUCUGaaccauuuugauucccugcaccguuauuucguuguggcauaaucaaauuaagccauugauuuuauguuuguggaaaacguuucugaucacucacgcaaaaugaugucaauuuu
.((((...((((((((((((((.(.(((((.((((...(((((((..(((((.((......)).)))))...))))))).....((((.(((.....))).)))).....))))..))))).)))))))))))))))...)))).

Structure

u    guu              C A     -U    ----------------------------cau       -cc     c  uu 
 aaau   caUCAUUUUGCGUG A UGAUC  Gaac                               uuugauu   cugca cg  a
 ||||   |||||||||||||| | |||||  ||||                               |||||||   ||||| ||   
 uuua   guaguaaaacgcac u acuag  uuug                               aaacuaa   ggugu gc  u
u    acu              - c     uc    caaaagguguuuguauuuuaguuaccgaauu       uac     u  uu 

Annotation confidence Not enough data

Genome context

chr1: 49411416-49411560 [+]

Mature gma-miR1515a

• Accession: MIMAT0007374
• Description: Glycine max gma-miR1515a mature miRNA
• Sequence: 11 - UCAUUUUGCGUGCAAUGAUCUG - 32
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18402695
   Novel and nodulation-regulated microRNAs in soybean roots
   Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O
   BMC Genomics (2008) 9:160