Stem-loop gma-MIR1520c

Accession

MI0007252

Description

Glycine max gma-MIR1520c precursor miRNA

Gene family

MIPF0000581; MIR1520

Literature search

3 open access papers mention gma-MIR1520c
(3 sentences)

Sequence

augaugacugucacgugucauauucugauugaucaauaaaaauaauaauacauuuuauuuuuuauggaguugacauccaaucagaacaugacacaugacaaacaucaUUCAAUAAGAACGUGACACGUGAcaguuaacau
(((.(((((((((((((((((.((((.(((((.....((((((((.........))))))))..((((.......)))).(((.....)))...((((......))))))))).)))).))))))))))))))))).)))

Structure

   a                 a    g     ucaauaaaaauaauaauacauuuuauuuuuuauggaguugacauccaaucagaacaugacac    ca 
aug ugacugucacgugucau uucu auuga                                                              auga  a
||| ||||||||||||||||| |||| |||||                                                              ||||   
uac auugacAGUGCACAGUG AAGA UAACU                                                              Uacu  a
   a                 C    A     --------------------------------------------------------------    ac 

Annotation confidence Not enough data

Genome context

chr17: 37603731-37603870 [+]

Mature gma-miR1520c

• Accession: MIMAT0007395
• Description: Glycine max gma-miR1520c mature miRNA
• Sequence: 108 - UUCAAUAAGAACGUGACACGUGA - 130
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18402695
   Novel and nodulation-regulated microRNAs in soybean roots
   Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O
   BMC Genomics (2008) 9:160