miRBase entry: gga-mir-1563

Stem-loop gga-mir-1563


Accession
MI0007288
Description
Gallus gallus gga-mir-1563 precursor miRNA

Literature search
1 open access papers mention gga-mir-1563
(1 sentences)

Sequence

64 reads, 3 reads per million, 5 experiments
agcccaaaGCACAUGAUGAGGAAGCACUGAAAcugacucuguaugaagugcauucaauccaaugcugagcu
(((....((((...(((..(((.(((((...((.......))....))))).))).)))...))))..)))

Structure
   ccaa    CAU   GA   A     -GAA  ug 
agc    aGCA   GAU  GGA GCACU    Ac  a
|||    ||||   |||  ||| |||||    ||  c
ucg    ucgu   cua  cuu cguga    ug  u
   --ag    aac   -a   a     agua  uc 


Annotation confidence Not enough data
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Genome context
chr12: 783184-783254 [+]

Database links

Mature gga-miR-1563

Accession MIMAT0007422
Description Gallus gallus gga-miR-1563 mature miRNA
Sequence 9 - GCACAUGAUGAGGAAGCACUGAAA - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964