miRBase entry: gga-mir-1588

Stem-loop gga-mir-1588


Accession
MI0007315
Description
Gallus gallus gga-mir-1588 precursor miRNA


Sequence

gcucccauggccccgcagugcccuCAGGAACCAGCUUUCGGCUCUcguggugcuugccuggagcugugcuguugguuccuuuggcccugggucccuccccgc
........((..((.(((.(((...((((((((((...((((((.((.(((....)))))))))))....))))))))))..))).)))))..)).......

Structure
gcucccau  cc  g   u   cuC          -UUU      U  u   g 
        gg  cc cag gcc   AGGAACCAGC    CGGCUC cg ggu c
        ||  || ||| |||   ||||||||||    |||||| || |||  
        cc  gg guc cgg   uccuugguug    gucgag gu ccg u
-cgccccu  cu  -   c   -uu          ucgu      -  -   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr14: 14147507-14147608 [-]

Database links

Mature gga-miR-1588

Accession MIMAT0007450
Description Gallus gallus gga-miR-1588 mature miRNA
Sequence 25 - CAGGAACCAGCUUUCGGCUCU - 45
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964