miRBase entry: gga-mir-1596

Stem-loop gga-mir-1596


Accession
MI0007323
Description
Gallus gallus gga-mir-1596 precursor miRNA

Literature search
2 open access papers mention gga-mir-1596
(5 sentences)

Sequence

7 reads, 0 reads per million, 1 experiments
uggacuuuguuucAUUCUCCUUCAAUCCAUCUUUGUcaugauuuacaaaaagaacAAAGGUGGCCGUGGGUGAAUGAagccaggcaucca
(((((((.(((((((((.(((.....((((((((((..(...........)..))))))))))....))).))))))))).)))..))))

Structure
    --   u         U   UCAAU          ca gauu 
ugga  cuu guuucAUUC CCU     CCAUCUUUGU  u    u
||||  ||| ||||||||| |||     ||||||||||  |    a
accu  gga cgaAGUAAG GGG     GGUGGAAAca  a    c
    ac   c         U   -UGCC          ag aaaa 


Annotation confidence Not enough data
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Genome context
chr1: 5811652-5811741 [+]

Database links

Mature gga-miR-1596-5p

Accession MIMAT0007460
Description Gallus gallus gga-miR-1596-5p mature miRNA
Sequence 14 - AUUCUCCUUCAAUCCAUCUUUGU - 36
Evidence experimental
Illumina [1]

Mature gga-miR-1596-3p

Accession MIMAT0007461
Description Gallus gallus gga-miR-1596-3p mature miRNA
Sequence 56 - AAAGGUGGCCGUGGGUGAAUGA - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964