miRBase entry: gga-mir-1604

Stem-loop gga-mir-1604


Accession
MI0007331
Description
Gallus gallus gga-mir-1604 precursor miRNA


Sequence

35 reads, 1 reads per million, 4 experiments
ucugucccacugcaggcugUGGGCCCAGGGCUGUGCUGGAGAcaucccagugcccagccagccaugguccugcagccuggggcccucuugguccaga
((((..(((((.(((((((((((.(((.(((((.(((((..((......))..)))))))))).))).))))))))))).))......)))..))))

Structure
    uc   ------  g           C   G     U     AG  au 
ucug  cca      cu caggcugUGGG CCA GGCUG GCUGG  Ac  c
||||  |||      || ||||||||||| ||| ||||| |||||  ||   
agac  ggu      gg guccgacgucc ggu ccgac cgacc  ug  c
    cu   ucuccc  g           u   a     -     cg  ac 


Annotation confidence Not enough data
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Genome context
chr1: 317086-317182 [+]

Database links

Mature gga-miR-1604

Accession MIMAT0007470
Description Gallus gallus gga-miR-1604 mature miRNA
Sequence 20 - UGGGCCCAGGGCUGUGCUGGAGA - 42
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964