miRBase entry: gga-mir-1625

Stem-loop gga-mir-1625


Accession
MI0007354
Description
Gallus gallus gga-mir-1625 precursor miRNA


Sequence

88 reads, 2 reads per million, 4 experiments
gcuguugggcuUGGACCAGGGCUCUUCCUGCUGGCUgguuccuggauaaGCAGCAGAAUAUCCCUGCCAUUcccugcugc
((.((.(((..(((..(((((...(((.(((((.((.(((....))).))))))))))...))))))))..))).)).))

Structure
  u  u   cu   AC     CUC   C     G  g   c 
gc gu ggg  UGG  CAGGG   UUC UGCUG CU guu c
|| || |||  |||  |||||   ||| ||||| || |||  
cg cg ccc  ACC  GUCCC   AAG ACGAC Ga uag u
  u  u   UU   --     UAU   -     -  a   g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr15: 7616546-7616625 [-]

Database links

Mature gga-miR-1625-5p

Accession MIMAT0007493
Description Gallus gallus gga-miR-1625-5p mature miRNA
Sequence 12 - UGGACCAGGGCUCUUCCUGCUGGCU - 36
Evidence experimental
Illumina [1]

Mature gga-miR-1625-3p

Accession MIMAT0007494
Description Gallus gallus gga-miR-1625-3p mature miRNA
Sequence 50 - GCAGCAGAAUAUCCCUGCCAUU - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964