miRBase entry: gga-mir-1640

Stem-loop gga-mir-1640


Accession
MI0007372
Description
Gallus gallus gga-mir-1640 precursor miRNA


Sequence

gcugcgggcugggcagggcccguggggcccuggcaugugccgagcucagggcUUGUCACUGCAGGGCCCCGCGGCCccuuccagcccuggc
((((.((((((((.((((.(((((((((((((.((.(((.((((((...)))))).)))))))))))))))))).))))))))))))))))

Structure
    c        c    c             g  u   c      c 
gcug gggcuggg aggg ccguggggcccug ca gug cgagcu  
|||| |||||||| |||| ||||||||||||| || ||| |||||| a
cggu cccgaccu uccC GGCGCCCCGGGAC GU CAC GUUcgg  
    -        -    C             -  -   U      g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr15: 10018792-10018882 [+]

Database links

Mature gga-miR-1640

Accession MIMAT0007515
Description Gallus gallus gga-miR-1640 mature miRNA
Sequence 53 - UUGUCACUGCAGGGCCCCGCGGCC - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964