miRBase entry: gga-mir-1641

Stem-loop gga-mir-1641


Accession
MI0007373
Description
Gallus gallus gga-mir-1641 precursor miRNA
Gene family
MIPF0001533; mir-1641


Sequence

44 reads, 2 reads per million, 4 experiments
gaugcagggcauuuccUGAGGAUUAAUGACUGUCUGGGgucaucaucuccucccaguuaguuauuaauccccaggaaauacucugugccuugauc
(((.((((((((((((((.(((((((((((((.((((((...........)))))).))))))))))))).)))))).......)))))))))))

Structure
   g        -------      A             U      ucau 
gau cagggcau       uuccUG GGAUUAAUGACUG CUGGGg    c
||| ||||||||       |||||| ||||||||||||| ||||||    a
cua guuccgug       aaggac ccuaauuauugau gacccu    u
   -        ucucaua      c             u      ccuc 


Annotation confidence Not enough data
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Genome context
chr3: 13265623-13265717 [-]

Database links

Mature gga-miR-1641

Accession MIMAT0007516
Description Gallus gallus gga-miR-1641 mature miRNA
Sequence 17 - UGAGGAUUAAUGACUGUCUGGG - 38
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964