Stem-loop sequence gga-mir-1684a

Accession

MI0007418 (change log)

Previous IDs

gga-mir-1684

Description

Gallus gallus miR-1684 stem-loop

Gene family

MIPF0001537; mir-1684

Literature search

4 open access papers mention gga-mir-1684a
(7 sentences)

Stem-loop

       u     ---u  a            gc          a  cu   cu 
5' ugga cgggu    ug aaggagagcucu  uuccucauac ua  cau  u
   |||| |||||    || ||||||||||||  |||||||||| ||  |||  u
3' auuu gucca    ac uuccucucgagg  aaggaguaug au  gua  u
       u     ccuu  c            ua          a  ag   uc 

Deep sequencing

3335 reads, 0 reads per million, 5 experiments

Confidence

Annotation confidence: not enough data

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Database links

• EntrezGene:MIR1684
• RNAcentral:URS0000759DF3_9031
• miRBase Tracker:MI0007418

Mature sequence gga-miR-1684a-5p

• Accession: MIMAT0007571
• Previous IDs: gga-miR-1684*
• Sequence: 21 - agcucugcuuccucauacauac - 42
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetScanVert:gga-miR-1684a-5p
  • miRDB:gga-miR-1684a-5p

Mature sequence gga-miR-1684a-3p

• Accession: MIMAT0007572
• Previous IDs: gga-miR-1684
• Sequence: 60 - aaguaugaggaaauggagcucu - 81
• Deep sequencing: 3333 reads, 5 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS0000759C6C_9031
• Predicted targets:
  • TargetScanVert:gga-miR-1684a-3p
  • miRDB:gga-miR-1684a-3p

References

1. PMID:18469162 "A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach" Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML Genome Res. 18:957-964(2008).