Stem-loop gga-mir-1685

Accession

MI0007419

Description

Gallus gallus gga-mir-1685 precursor miRNA

Sequence

16 reads, 1 reads per million, 4 experiments

guuuuuuaguggcacaguUGGAGUCACUACCAGUGCUGUGuuugacuacguauguaaccACAGUAAUGGUAUGAACUCAGAugugcuacagaaau
..(((((.((((((((....((((((.(((((.(((((((....((.......))...))))))).))))))).))))...))))))))))))).

Structure

gu     a        guUG    -  C     G       uuug  ua 
  uuuuu guggcaca    GAGU CA UACCA UGCUGUG    ac  c
  ||||| ||||||||    |||| || ||||| |||||||    ||  g
  aaaga caucgugu    CUCA GU AUGGU AUGACAc    ug  u
-u     -        -AGA    A  -     A       -caa  ua 

Annotation confidence Not enough data

Genome context

chr2: 24811597-24811691 [+]

Mature gga-miR-1685-5p

• Accession: MIMAT0007573
• Description: Gallus gallus gga-miR-1685-5p mature miRNA
• Sequence: 19 - UGGAGUCACUACCAGUGCUGUG - 40
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1685-3p

• Accession: MIMAT0007574
• Description: Gallus gallus gga-miR-1685-3p mature miRNA
• Sequence: 60 - ACAGUAAUGGUAUGAACUCAGA - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964