miRBase entry: gga-mir-1711

Stem-loop gga-mir-1711


Accession
MI0007448
Description
Gallus gallus gga-mir-1711 precursor miRNA

Literature search
2 open access papers mention gga-mir-1711
(3 sentences)

Sequence

1 reads, 0 reads per million, 1 experiments
cacuGUGCAGUGCUGCAUCUCUUCaaagacauuuauuguggagacugggguuuguuagcuguguugug
(((..(((((((((.(((((((.(((.........))).))))).)).)))......))))))..)))

Structure
   uG      ------   G  -     U   aga 
cac  UGCAGU      GCU CA UCUCU Caa   c
|||  ||||||      ||| || ||||| |||   a
gug  gugucg      ugg gu agagg guu   u
   uu      auuguu   g  c     u   auu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr12: 16440167-16440234 [-]

Database links

Mature gga-miR-1711

Accession MIMAT0007606
Description Gallus gallus gga-miR-1711 mature miRNA
Sequence 5 - GUGCAGUGCUGCAUCUCUUC - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964