miRBase entry: gga-mir-1729

Stem-loop gga-mir-1729


Accession
MI0007468
Description
Gallus gallus gga-mir-1729 precursor miRNA
Gene family
MIPF0000816; mir-1729

Literature search
3 open access papers mention gga-mir-1729
(4 sentences)

Sequence

2987 reads, 39 reads per million, 5 experiments
ccugcAUCCCUUACUCACAUGAGUAGUCguaucuauuucagugggaCUACUCGGUGAGUAAGGAUAGCagg
(((((((((.((((((((.(((((((((.(((........))).))))))))))))))))))))).)))))

Structure
     -    C        A         g   cua 
ccugc AUCC UUACUCAC UGAGUAGUC uau   u
||||| |||| |||||||| ||||||||| |||    
ggaCG UAGG AAUGAGUG GCUCAUCag gug   u
     A    -        -         g   acu 


Annotation confidence High
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Genome context
chr15: 762734-762804 [+]

Database links

Mature gga-miR-1729-5p

Accession MIMAT0007629
Description Gallus gallus gga-miR-1729-5p mature miRNA
Sequence 6 - AUCCCUUACUCACAUGAGUAGUC - 28
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature gga-miR-1729-3p

Accession MIMAT0007630
Description Gallus gallus gga-miR-1729-3p mature miRNA
Sequence 47 - CUACUCGGUGAGUAAGGAUAGC - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964