miRBase entry: gga-mir-1731

Stem-loop gga-mir-1731


Accession
MI0007470
Description
Gallus gallus gga-mir-1731 precursor miRNA


Sequence

88 reads, 1 reads per million, 5 experiments
cuuggccucugcuggaagccggguACUUGACUGCAGGCACUGCUGCUcuguuccagauUGGCAGUUCCUUGGUCUUGUCCuugucuccaguuccuuccuaag
(((((.....((((((.((.(((.((..(((((.(((.(((((((.((((...)))).))))))).))))))))..))))).)).))))))......)))))

Structure
     -ccucu      a  c   u  UU     C   C       C    u 
cuugg      gcugga gc ggg AC  GACUG AGG ACUGCUG Ucug  
|||||      |||||| || ||| ||  ||||| ||| ||||||| |||| u
gaauc      ugaccu ug uCC UG  CUGGU UCC UGACGGU agac  
     cuuccu      c  u   -  UU     -   U       u    c 


Annotation confidence Not enough data
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Genome context
chr12: 10660971-10661072 [-]

Database links

Mature gga-miR-1731-5p

Accession MIMAT0007633
Description Gallus gallus gga-miR-1731-5p mature miRNA
Sequence 25 - ACUUGACUGCAGGCACUGCUGCU - 47
Evidence experimental
Illumina [1-2]

Mature gga-miR-1731-3p

Accession MIMAT0026780
Description Gallus gallus gga-miR-1731-3p mature miRNA
Sequence 59 - UGGCAGUUCCUUGGUCUUGUCC - 80
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45