Stem-loop sequence gga-mir-1744

Accession

MI0007483 (change log)

Description

Gallus gallus miR-1744 stem-loop

Gene family

MIPF0001589; mir-1744

Literature search

2 open access papers mention gga-mir-1744
(4 sentences)

Stem-loop

   --         a c    gc     -       c    a   uga 
5'   ggagucagg c cagu  ugcuc uguugaa ucaa agc   a
     ||||||||| | ||||  ||||| ||||||| |||| |||    
3'   uuuuagucc g guca  acgag acaacuu aguu uug   c
   cc         c a    ga     g       c    g   ucc 

Deep sequencing

95 reads, 0 reads per million, 5 experiments

Confidence

Annotation confidence: not enough data

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Database links

• EntrezGene:MIR1744
• miRBase Tracker:MI0007483

Mature sequence gga-miR-1744-5p

• Accession: MIMAT0007648
• Previous IDs: gga-miR-1744*
• Sequence: 19 - ugcucuguugaacucaaaagcu - 40
• Deep sequencing: 6 reads, 4 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetScanVert:gga-miR-1744-5p
  • miRDB:gga-miR-1744-5p

Mature sequence gga-miR-1744-3p

• Accession: MIMAT0007649
• Previous IDs: gga-miR-1744
• Sequence: 55 - acuucaacaggagcaagacuga - 76
• Deep sequencing: 89 reads, 5 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetScanVert:gga-miR-1744-3p
  • miRDB:gga-miR-1744-3p

References

1. PMID:18469162 "A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach" Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML Genome Res. 18:957-964(2008).